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Trans-eQTLs across different cancer types

In trans-eQTL analysis, we identified 231,210 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

     

e.g., "PRAD"
e.g., "rs7231881"
e.g., "SMAD4"


     

Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
THCA rs7201498 chr16:20449449 T/C ZMYND12 chr1:42896000-42921938:- 0.26 5.97 4.74E-9 Box Plot
THCA rs7202566 chr16:75247644 C/A SLC5A7 chr2:108602979-108630450:+ 0.33 6.01 3.78E-9 Box Plot
THCA rs72030777 chr5:176536088 AACACACAC/A LOC388955 chr2:63849182-63850159:- -0.85 -21.9 3.69E-74 Box Plot
THCA rs7207123 chr17:18208544 G/A LOC162632 chr17:16614993-16707819:+ 0.39 6.36 4.6E-10 Box Plot
THCA rs7207306 chr17:18247362 C/T LOC162632 chr17:16614993-16707819:+ 0.38 5.9 6.8E-9 Box Plot
THCA rs72087025 chr6:28130411 AGAG/A BTN3A2 chr6:26365387-26378548:+ -0.53 -9.41 2.1E-19 Box Plot
THCA rs72087025 chr6:28130411 AGAG/A ZFP57 chr6:29640169-29648887:- 0.57 6.9 1.66E-11 Box Plot
THCA rs7209112 chr17:63862767 T/G BPGM chr7:134331560-134364565:+ 0.32 5.98 4.43E-9 Box Plot
THCA rs72103710 chr10:45938095 CTG/C AGAP8 chr10:51224681-51371321:- 0.4 6.18 1.39E-9 Box Plot
THCA rs7211382 chr17:18260488 G/A LOC162632 chr17:16614993-16707819:+ 0.42 6.67 6.97E-11 Box Plot
THCA rs72152976 chr1:26600683 CACTT/C GLRX chr5:95087023-95158709:- 0.27 6 3.96E-9 Box Plot
THCA rs7215488 chr17:67633954 G/A HAP1 chr17:39873994-39890896:- -0.44 -6.46 2.55E-10 Box Plot
THCA rs721600 chr6:27298905 C/T ZNF322B chr9:99957633-99961910:- -0.42 -6.15 1.6E-9 Box Plot
THCA rs72164066 chr6:27767173 TTTTG/T BTN3A2 chr6:26365387-26378548:+ -0.88 -12.43 6.11E-31 Box Plot
THCA rs72164066 chr6:27767173 TTTTG/T RNF5P1 chr8:38458179-38458718:- 0.7 6.13 1.88E-9 Box Plot